Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.05□□□□□ -0.64
Lims1Q99JW4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Rprl1-201ENSMUST00000158050 327 ntBASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm27023-201ENSMUST00000182372 285 ntBASIC11.05□□□□□ -0.64
Lims1Q99JW4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.05□□□□□ -0.64
Lims1Q99JW4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lims1Q99JW4 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.05□□□□□ -0.64
Lims1Q99JW4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm13875-201ENSMUST00000120162 282 ntBASIC11.04□□□□□ -0.64
Lims1Q99JW4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm8420-201ENSMUST00000097103 598 ntBASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.04□□□□□ -0.64
Lims1Q99JW4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.04□□□□□ -0.64
Lims1Q99JW4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms