Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhac2Q91Y09 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm22920-201ENSMUST00000102175 109 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm1848-201ENSMUST00000120711 789 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm25072-201ENSMUST00000175233 235 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm5706-201ENSMUST00000181525 993 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm4654-201ENSMUST00000183305 982 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm17931-201ENSMUST00000208132 634 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhac2Q91Y09 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm25076-201ENSMUST00000104098 132 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm14193-201ENSMUST00000105067 153 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm12795-201ENSMUST00000117594 539 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm22138-201ENSMUST00000158748 128 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm23153-201ENSMUST00000175323 313 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Mir6998-201ENSMUST00000183343 64 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm4034-201ENSMUST00000187674 480 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gm5714-201ENSMUST00000197343 566 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhac2Q91Y09 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms