Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gm15610-201ENSMUST00000120584 195 ntBASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gm19187-201ENSMUST00000206781 892 ntBASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb1Q91Y08 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.58□□□□□ -0.39
Pcdhb1Q91Y08 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.58□□□□□ -0.39
Pcdhb1Q91Y08 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm11989-201ENSMUST00000117240 672 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm14109-201ENSMUST00000118814 309 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm11362-201ENSMUST00000118838 850 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm7722-201ENSMUST00000120646 741 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm12164-201ENSMUST00000121695 551 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm8885-201ENSMUST00000189382 598 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm17931-201ENSMUST00000208132 634 ntBASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms