Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm15198-201ENSMUST00000117283 177 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm27046-201ENSMUST00000182160 463 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm38241-201ENSMUST00000192641 898 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm18893-201ENSMUST00000198416 943 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Paupar-201ENSMUST00000194826 3482 ntBASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb6Q91XZ4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gm14723-201ENSMUST00000118686 215 ntBASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gzmn-202ENSMUST00000225535 989 ntBASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb6Q91XZ4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Gm11434-201ENSMUST00000122379 629 ntBASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Gm37259-201ENSMUST00000193903 849 ntBASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Gm3961-201ENSMUST00000204425 994 ntBASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms