Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.86□□□□□ -0.19
Trex1Q91XB0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trex1Q91XB0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trex1Q91XB0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.85□□□□□ -0.19
Trex1Q91XB0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm14585-201ENSMUST00000120713 634 ntBASIC13.85□□□□□ -0.19
Trex1Q91XB0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.85□□□□□ -0.19
Trex1Q91XB0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm19287-201ENSMUST00000203190 358 ntBASIC13.85□□□□□ -0.19
Trex1Q91XB0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm6867-201ENSMUST00000219165 425 ntBASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.85□□□□□ -0.19
Trex1Q91XB0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trex1Q91XB0 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.85□□□□□ -0.19
Trex1Q91XB0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Gm9540-201ENSMUST00000188230 478 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 Gm38117-201ENSMUST00000194653 939 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.84□□□□□ -0.19
Trex1Q91XB0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trex1Q91XB0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.83□□□□□ -0.19
Trex1Q91XB0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trex1Q91XB0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trex1Q91XB0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
Trex1Q91XB0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.83□□□□□ -0.2
Trex1Q91XB0 Gm15352-201ENSMUST00000118696 270 ntBASIC13.83□□□□□ -0.2
Trex1Q91XB0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Gm15782-201ENSMUST00000121073 445 ntBASIC13.83□□□□□ -0.2
Trex1Q91XB0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Mir8115-201ENSMUST00000184992 119 ntBASIC13.83□□□□□ -0.2
Trex1Q91XB0 Gm10752-201ENSMUST00000218348 729 ntBASIC13.83□□□□□ -0.2
Trex1Q91XB0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms