Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Rubie-203ENSMUST00000227803 2430 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Gm2260-201ENSMUST00000184965 657 ntBASIC12.6□□□□□ -0.39
Usp3Q91W36 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Gm37666-201ENSMUST00000194110 866 ntBASIC12.6□□□□□ -0.39
Usp3Q91W36 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Gm18871-201ENSMUST00000218655 745 ntBASIC12.6□□□□□ -0.39
Usp3Q91W36 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.6□□□□□ -0.39
Usp3Q91W36 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usp3Q91W36 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp3Q91W36 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.6□□□□□ -0.39
Usp3Q91W36 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Usp3Q91W36 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Usp3Q91W36 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm22588-201ENSMUST00000157510 140 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm7003-201ENSMUST00000195089 312 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm45433-201ENSMUST00000209386 247 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 AC132384.10-201ENSMUST00000217862 1204 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Usp3Q91W36 Gm22005-201ENSMUST00000082795 141 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.59□□□□□ -0.39
Usp3Q91W36 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp3Q91W36 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp3Q91W36 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms