Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm11956-201ENSMUST00000119525 512 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Gm8100-201ENSMUST00000182906 988 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Gm6867-201ENSMUST00000219165 425 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Gm5455-201ENSMUST00000058710 715 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.02□□□□□ -0.49
Vsx1Q91V10 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx1Q91V10 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Mir1956-201ENSMUST00000157748 65 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Gm28388-201ENSMUST00000186262 437 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.01□□□□□ -0.49
Vsx1Q91V10 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.01□□□□□ -0.49
Vsx1Q91V10 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vsx1Q91V10 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12□□□□□ -0.49
Vsx1Q91V10 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vsx1Q91V10 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms