Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm25857-201ENSMUST00000082788 129 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Gm8602-201ENSMUST00000184045 607 ntBASIC12.53□□□□□ -0.4
Trim60Q8VI40 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.53□□□□□ -0.4
Trim60Q8VI40 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim60Q8VI40 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.52□□□□□ -0.4
Trim60Q8VI40 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.52□□□□□ -0.4
Trim60Q8VI40 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim60Q8VI40 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.52□□□□□ -0.41
Trim60Q8VI40 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim60Q8VI40 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms