Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm29499-201ENSMUST00000189151 486 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm28329-201ENSMUST00000191208 689 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm29171-201ENSMUST00000191397 486 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm5714-201ENSMUST00000197343 566 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm2517-201ENSMUST00000215651 348 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp7Q8R1T1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Gm12579-201ENSMUST00000118040 783 ntBASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Gm15352-201ENSMUST00000118696 270 ntBASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Gm7600-201ENSMUST00000209657 785 ntBASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Gm2553-201ENSMUST00000215986 605 ntBASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp7Q8R1T1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Gm8731-201ENSMUST00000118088 412 ntBASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Gm5706-201ENSMUST00000181525 993 ntBASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Gm10752-201ENSMUST00000218348 729 ntBASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Chmp7Q8R1T1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp7Q8R1T1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Chmp7Q8R1T1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp7Q8R1T1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp7Q8R1T1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.46■□□□□ 0.06
Chmp7Q8R1T1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp7Q8R1T1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp7Q8R1T1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms