Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn1Q8K445 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.43□□□□□ -0.58
Clrn1Q8K445 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm14109-201ENSMUST00000118814 309 ntBASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm42599-201ENSMUST00000201308 469 ntBASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm7783-201ENSMUST00000204795 781 ntBASIC11.43□□□□□ -0.58
Clrn1Q8K445 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.43□□□□□ -0.58
Clrn1Q8K445 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn1Q8K445 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm24255-201ENSMUST00000104481 128 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Rprl1-201ENSMUST00000158050 327 ntBASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.42□□□□□ -0.58
Clrn1Q8K445 Gm20482-202ENSMUST00000174729 825 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms