Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.8□□□□□ -0.68
ShfQ8CG80 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.8□□□□□ -0.68
ShfQ8CG80 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.8□□□□□ -0.68
ShfQ8CG80 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Mir1247-201ENSMUST00000116706 82 ntBASIC10.8□□□□□ -0.68
ShfQ8CG80 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm13316-201ENSMUST00000140537 691 ntBASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.8□□□□□ -0.68
ShfQ8CG80 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.8□□□□□ -0.68
ShfQ8CG80 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
ShfQ8CG80 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ShfQ8CG80 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.79□□□□□ -0.68
ShfQ8CG80 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.79□□□□□ -0.68
ShfQ8CG80 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.79□□□□□ -0.68
ShfQ8CG80 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Gm17931-201ENSMUST00000208132 634 ntBASIC10.79□□□□□ -0.68
ShfQ8CG80 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.79□□□□□ -0.68
ShfQ8CG80 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.79□□□□□ -0.68
ShfQ8CG80 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.79□□□□□ -0.68
ShfQ8CG80 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
ShfQ8CG80 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ShfQ8CG80 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms