Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm9823-201ENSMUST00000051212 327 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc87Q8CDL9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm7399-201ENSMUST00000032395 858 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc87Q8CDL9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Gm11597-201ENSMUST00000121423 964 ntBASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Gm42627-201ENSMUST00000197347 224 ntBASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Gm45331-201ENSMUST00000209868 554 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms