Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gm43758-201ENSMUST00000199500 367 ntBASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gm18753-201ENSMUST00000201000 566 ntBASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Mir877-201ENSMUST00000104738 85 ntBASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gm13316-201ENSMUST00000140537 691 ntBASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcpip1Q8CDG3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vcpip1Q8CDG3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Gm38341-201ENSMUST00000195357 515 ntBASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Gm3786-201ENSMUST00000202659 378 ntBASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Gm18935-201ENSMUST00000212692 664 ntBASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Gm9368-201ENSMUST00000219348 831 ntBASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Cts7-204ENSMUST00000225321 1257 ntBASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcpip1Q8CDG3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms