Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Cog3-203ENSMUST00000227473 4197 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm13342-201ENSMUST00000121055 207 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm8652-201ENSMUST00000181363 964 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm26927-201ENSMUST00000182385 965 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lysmd4Q8CC84 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Gm44405-201ENSMUST00000198952 126 ntBASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Gm45925-201ENSMUST00000218882 744 ntBASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Gm10076-201ENSMUST00000073238 384 ntBASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lysmd4Q8CC84 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Lysmd4Q8CC84 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Lysmd4Q8CC84 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms