Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh3rf2Q8BZT2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Gm14724-201ENSMUST00000118400 537 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Gm10051-201ENSMUST00000145209 414 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Gm5705-201ENSMUST00000066241 711 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Gm10288-201ENSMUST00000084614 537 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh3rf2Q8BZT2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm8566-201ENSMUST00000120174 465 ntBASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm2965-201ENSMUST00000198365 343 ntBASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm6905-201ENSMUST00000205729 511 ntBASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm9797-202ENSMUST00000218003 294 ntBASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh3rf2Q8BZT2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Sh3rf2Q8BZT2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms