Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube3dQ8BX13 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ube3dQ8BX13 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm11531-201ENSMUST00000117614 555 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm13875-201ENSMUST00000120162 282 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm37319-201ENSMUST00000193500 636 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm44405-201ENSMUST00000198952 126 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm43084-201ENSMUST00000200696 947 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm18056-201ENSMUST00000207670 568 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm18061-201ENSMUST00000208350 562 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm18063-201ENSMUST00000208529 568 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm18052-201ENSMUST00000208750 559 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube3dQ8BX13 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm5950-201ENSMUST00000213337 772 ntBASIC10.82□□□□□ -0.68
Ube3dQ8BX13 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.82□□□□□ -0.68
Ube3dQ8BX13 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube3dQ8BX13 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms