Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Gm16505-201ENSMUST00000179981 232 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Gm8956-201ENSMUST00000203939 825 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.4□□□□□ -0.42
Nup54Q8BTS4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup54Q8BTS4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup54Q8BTS4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup54Q8BTS4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup54Q8BTS4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup54Q8BTS4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.39□□□□□ -0.43
Nup54Q8BTS4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm18038-201ENSMUST00000197900 485 ntBASIC12.39□□□□□ -0.43
Nup54Q8BTS4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm17931-201ENSMUST00000208132 634 ntBASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm270-201ENSMUST00000223010 976 ntBASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup54Q8BTS4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms