Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Usp54Q8BL06 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Gm23694-201ENSMUST00000179335 110 ntBASIC16.93■□□□□ 0.3
Usp54Q8BL06 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.93■□□□□ 0.3
Usp54Q8BL06 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC16.93■□□□□ 0.3
Usp54Q8BL06 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm9415-201ENSMUST00000200462 1321 ntBASIC16.92■□□□□ 0.3
Usp54Q8BL06 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm12218-201ENSMUST00000117666 399 ntBASIC16.92■□□□□ 0.3
Usp54Q8BL06 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm24248-201ENSMUST00000157321 322 ntBASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm5621-201ENSMUST00000187303 640 ntBASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Gm8146-201ENSMUST00000192106 1847 ntBASIC16.92■□□□□ 0.3
Usp54Q8BL06 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp54Q8BL06 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Gm25554-201ENSMUST00000158075 113 ntBASIC16.91■□□□□ 0.3
Usp54Q8BL06 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Mt1-202ENSMUST00000211807 1085 ntBASIC16.91■□□□□ 0.3
Usp54Q8BL06 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp54Q8BL06 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm12194-201ENSMUST00000117756 1012 ntBASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm15528-201ENSMUST00000117821 864 ntBASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm11500-201ENSMUST00000118237 601 ntBASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm12274-201ENSMUST00000120062 385 ntBASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm20414-201ENSMUST00000172918 646 ntBASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm43163-201ENSMUST00000196571 442 ntBASIC16.9■□□□□ 0.3
Usp54Q8BL06 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Usp54Q8BL06 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC16.9■□□□□ 0.3
Usp54Q8BL06 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms