Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm13736-201ENSMUST00000119272 253 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm7809-201ENSMUST00000153199 742 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm44958-201ENSMUST00000203734 736 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm45930-201ENSMUST00000221330 292 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chmp2bQ8BJF9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2bQ8BJF9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.41□□□□□ -0.42
Chmp2bQ8BJF9 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms