Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm27243-201ENSMUST00000183964 521 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Mir1247-201ENSMUST00000116706 82 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm12314-201ENSMUST00000118104 538 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm37008-201ENSMUST00000195712 319 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm18062-201ENSMUST00000208020 547 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm18055-201ENSMUST00000208254 547 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccdc40Q8BI79 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc40Q8BI79 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc40Q8BI79 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.71□□□□□ -0.38
Ccdc40Q8BI79 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms