Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Gm4986-201ENSMUST00000119731 549 ntBASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Morn2-202ENSMUST00000227729 656 ntBASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm13297-201ENSMUST00000120205 934 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm23119-201ENSMUST00000158610 140 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm2546-201ENSMUST00000182630 991 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Olfr284-202ENSMUST00000206647 966 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clrn3Q8BHH8 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm11222-201ENSMUST00000119005 738 ntBASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm14999-201ENSMUST00000121039 624 ntBASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm13570-201ENSMUST00000140763 309 ntBASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm42693-201ENSMUST00000196779 631 ntBASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm18935-201ENSMUST00000212692 664 ntBASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms