Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ubp1Q811S7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubp1Q811S7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm11893-201ENSMUST00000117829 491 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm14109-201ENSMUST00000118814 309 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm28195-201ENSMUST00000186992 372 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm19080-201ENSMUST00000196082 550 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gzmn-202ENSMUST00000225535 989 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm9996-201ENSMUST00000070359 913 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Matn2-203ENSMUST00000226766 3252 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.01□□□□□ -0.49
Ubp1Q811S7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubp1Q811S7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Ubp1Q811S7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12□□□□□ -0.49
Ubp1Q811S7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm40377-201ENSMUST00000204604 2015 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm24830-201ENSMUST00000102024 166 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12□□□□□ -0.49
Ubp1Q811S7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm5070-201ENSMUST00000177599 862 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12□□□□□ -0.49
Ubp1Q811S7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm26232-201ENSMUST00000083360 166 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ubp1Q811S7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12□□□□□ -0.49
Ubp1Q811S7 Gm43075-201ENSMUST00000198613 3905 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12□□□□□ -0.49
Ubp1Q811S7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ubp1Q811S7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubp1Q811S7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms