Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm15004-201ENSMUST00000119192 630 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm11246-201ENSMUST00000120880 345 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Mir7076-201ENSMUST00000183519 74 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Mir8115-201ENSMUST00000184992 119 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm15352-201ENSMUST00000118696 270 ntBASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm11660-201ENSMUST00000120955 412 ntBASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm38210-201ENSMUST00000191944 809 ntBASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm44882-201ENSMUST00000205702 802 ntBASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm2517-201ENSMUST00000215651 348 ntBASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp6nlQ80XC3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Gm12795-201ENSMUST00000117594 539 ntBASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Mir1901-201ENSMUST00000122616 78 ntBASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Gm23771-201ENSMUST00000178702 110 ntBASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Gm37299-201ENSMUST00000193951 826 ntBASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Gm37905-201ENSMUST00000195310 341 ntBASIC13.37□□□□□ -0.27
Usp6nlQ80XC3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms