Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm15236-201ENSMUST00000117309 379 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm12164-201ENSMUST00000121695 551 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Mir7677-201ENSMUST00000184226 67 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm18038-201ENSMUST00000197900 485 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim62Q80V85 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm8385-201ENSMUST00000058999 643 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim62Q80V85 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.54□□□□□ -0.4
Trim62Q80V85 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim62Q80V85 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim62Q80V85 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim62Q80V85 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm28071-201ENSMUST00000190355 478 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm17931-201ENSMUST00000208132 634 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm18730-201ENSMUST00000218038 343 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim62Q80V85 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim62Q80V85 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.53□□□□□ -0.4
Trim62Q80V85 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim62Q80V85 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim62Q80V85 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim62Q80V85 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim62Q80V85 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Trim62Q80V85 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim62Q80V85 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.52□□□□□ -0.4
Trim62Q80V85 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim62Q80V85 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim62Q80V85 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim62Q80V85 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms