Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85bQ6PDY0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm13916-201ENSMUST00000117368 628 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm15595-201ENSMUST00000120840 961 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm8737-201ENSMUST00000122208 642 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm24398-201ENSMUST00000157870 109 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm23045-201ENSMUST00000175041 96 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm5100-201ENSMUST00000195631 589 ntBASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85bQ6PDY0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm15352-201ENSMUST00000118696 270 ntBASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm6630-201ENSMUST00000119199 454 ntBASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms