Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Gm8738-201ENSMUST00000172606 329 ntBASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smarcd3Q6P9Z1 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm11591-201ENSMUST00000120063 702 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd3Q6P9Z1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms