Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn9aQ62205 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Scn9aQ62205 Gm14270-201ENSMUST00000118388 846 ntBASIC14□□□□□ -0.17
Scn9aQ62205 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Gm24809-201ENSMUST00000175318 271 ntBASIC14□□□□□ -0.17
Scn9aQ62205 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14□□□□□ -0.17
Scn9aQ62205 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14□□□□□ -0.17
Scn9aQ62205 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14□□□□□ -0.17
Scn9aQ62205 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Gm15374-201ENSMUST00000119313 844 ntBASIC14□□□□□ -0.17
Scn9aQ62205 Gm15620-201ENSMUST00000122949 270 ntBASIC14□□□□□ -0.17
Scn9aQ62205 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14□□□□□ -0.17
Scn9aQ62205 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14□□□□□ -0.17
Scn9aQ62205 Gm43671-201ENSMUST00000200422 433 ntBASIC14□□□□□ -0.17
Scn9aQ62205 BC106175-202ENSMUST00000219344 1213 ntBASIC14□□□□□ -0.17
Scn9aQ62205 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Gm4978-201ENSMUST00000071565 801 ntBASIC14□□□□□ -0.17
Scn9aQ62205 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn9aQ62205 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn9aQ62205 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.99□□□□□ -0.17
Scn9aQ62205 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.99□□□□□ -0.17
Scn9aQ62205 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.99□□□□□ -0.17
Scn9aQ62205 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.99□□□□□ -0.17
Scn9aQ62205 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Scn9aQ62205 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Scn9aQ62205 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Scn9aQ62205 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn9aQ62205 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.99□□□□□ -0.17
Scn9aQ62205 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scn9aQ62205 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn9aQ62205 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn9aQ62205 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Gm6630-201ENSMUST00000119199 454 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Gm13445-201ENSMUST00000121664 307 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms