Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ctr9Q62018 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ctr9Q62018 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.32□□□□□ -0.12
Ctr9Q62018 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm17040-202ENSMUST00000170597 889 ntBASIC14.32□□□□□ -0.12
Ctr9Q62018 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.32□□□□□ -0.12
Ctr9Q62018 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm4034-201ENSMUST00000187674 480 ntBASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm28071-201ENSMUST00000190355 478 ntBASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.32□□□□□ -0.12
Ctr9Q62018 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ctr9Q62018 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctr9Q62018 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.31□□□□□ -0.12
Ctr9Q62018 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ctr9Q62018 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ctr9Q62018 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.31□□□□□ -0.12
Ctr9Q62018 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm44124-201ENSMUST00000204159 472 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm19208-201ENSMUST00000213861 912 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm18730-201ENSMUST00000218038 343 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.31□□□□□ -0.12
Ctr9Q62018 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.31□□□□□ -0.12
Ctr9Q62018 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ctr9Q62018 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ctr9Q62018 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctr9Q62018 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.3□□□□□ -0.12
Ctr9Q62018 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 AU022133-201ENSMUST00000200601 873 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms