Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.34□□□□□ -0.59
Sox17Q61473 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox17Q61473 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox17Q61473 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.34□□□□□ -0.59
Sox17Q61473 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox17Q61473 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sox17Q61473 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm14057-201ENSMUST00000120631 482 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm28911-201ENSMUST00000188837 117 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 Gm4768-201ENSMUST00000206199 686 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm44872-201ENSMUST00000207864 420 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm15823-201ENSMUST00000064305 670 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.33□□□□□ -0.6
Sox17Q61473 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Sox17Q61473 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox17Q61473 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox17Q61473 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Sox17Q61473 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox17Q61473 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox17Q61473 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Sox17Q61473 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Sox17Q61473 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.32□□□□□ -0.6
Sox17Q61473 Gm27701-201ENSMUST00000184498 110 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox17Q61473 Gm6007-201ENSMUST00000208170 823 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 Gm45668-201ENSMUST00000211271 493 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox17Q61473 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox17Q61473 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.32□□□□□ -0.6
Sox17Q61473 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Sox17Q61473 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox17Q61473 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox17Q61473 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms