Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Vsx2Q61412 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm12314-201ENSMUST00000118104 538 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm15547-201ENSMUST00000122152 333 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm6082-201ENSMUST00000215204 454 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm26035-201ENSMUST00000083065 308 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.83□□□□□ -0.52
Vsx2Q61412 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.83□□□□□ -0.52
Vsx2Q61412 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Gm26083-201ENSMUST00000157904 193 ntBASIC11.83□□□□□ -0.52
Vsx2Q61412 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.83□□□□□ -0.52
Vsx2Q61412 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vsx2Q61412 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx2Q61412 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.82□□□□□ -0.52
Vsx2Q61412 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.82□□□□□ -0.52
Vsx2Q61412 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Gm3096-201ENSMUST00000185770 364 ntBASIC11.82□□□□□ -0.52
Vsx2Q61412 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.82□□□□□ -0.52
Vsx2Q61412 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms