Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.14□□□□□ -0.15
Prdm1Q60636 Gm5455-201ENSMUST00000058710 715 ntBASIC14.14□□□□□ -0.15
Prdm1Q60636 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Prdm1Q60636 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.14□□□□□ -0.15
Prdm1Q60636 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.14□□□□□ -0.15
Prdm1Q60636 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Prdm1Q60636 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Prdm1Q60636 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prdm1Q60636 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Gm2260-201ENSMUST00000184965 657 ntBASIC14.13□□□□□ -0.15
Prdm1Q60636 Gm43962-201ENSMUST00000203898 190 ntBASIC14.13□□□□□ -0.15
Prdm1Q60636 Gm17931-201ENSMUST00000208132 634 ntBASIC14.13□□□□□ -0.15
Prdm1Q60636 Gm45433-201ENSMUST00000209386 247 ntBASIC14.13□□□□□ -0.15
Prdm1Q60636 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prdm1Q60636 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prdm1Q60636 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prdm1Q60636 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prdm1Q60636 Gm5419-201ENSMUST00000119301 527 ntBASIC14.12□□□□□ -0.15
Prdm1Q60636 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.12□□□□□ -0.15
Prdm1Q60636 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.12□□□□□ -0.15
Prdm1Q60636 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Prdm1Q60636 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.12□□□□□ -0.15
Prdm1Q60636 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.12□□□□□ -0.15
Prdm1Q60636 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prdm1Q60636 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prdm1Q60636 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Prdm1Q60636 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prdm1Q60636 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prdm1Q60636 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prdm1Q60636 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.11□□□□□ -0.15
Prdm1Q60636 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms