Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm9083-201ENSMUST00000120423 819 ntBASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm32025-201ENSMUST00000217960 307 ntBASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm19163-201ENSMUST00000223313 780 ntBASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm18304-201ENSMUST00000189162 546 ntBASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm44958-201ENSMUST00000203734 736 ntBASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms