Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gm15370-201ENSMUST00000117158 253 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Mir7085-201ENSMUST00000184353 66 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gm10478-201ENSMUST00000084451 396 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Brf2Q3UAW9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gm25214-201ENSMUST00000104573 129 ntBASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gm13297-201ENSMUST00000120205 934 ntBASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gm18935-201ENSMUST00000212692 664 ntBASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.41□□□□□ -0.58
Brf2Q3UAW9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Brf2Q3UAW9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms