Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm18733-202ENSMUST00000174447 401 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm45454-201ENSMUST00000211484 455 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm5424-201ENSMUST00000053865 1240 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Olfr1425-201ENSMUST00000087828 939 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm5510-201ENSMUST00000117826 486 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm44460-201ENSMUST00000196179 129 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm5982-201ENSMUST00000196234 512 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm45795-201ENSMUST00000211847 400 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 AC159002.1-201ENSMUST00000226714 924 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm10254-201ENSMUST00000052888 867 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Mir7115-201ENSMUST00000184275 64 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm42732-201ENSMUST00000202887 1197 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 CT009713.2-201ENSMUST00000225532 1149 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 AC114585.2-201ENSMUST00000227693 486 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Rab3c-202ENSMUST00000223922 2398 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm15702-201ENSMUST00000119680 444 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm15329-201ENSMUST00000121408 155 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm22669-201ENSMUST00000158723 318 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms