Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.94□□□□□ -0.5
Sox4Q06831 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox4Q06831 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Gm12997-201ENSMUST00000120207 640 ntBASIC11.94□□□□□ -0.5
Sox4Q06831 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox4Q06831 Gm24749-201ENSMUST00000157838 343 ntBASIC11.94□□□□□ -0.5
Sox4Q06831 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox4Q06831 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.94□□□□□ -0.5
Sox4Q06831 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox4Q06831 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.94□□□□□ -0.5
Sox4Q06831 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Gm8385-201ENSMUST00000058999 643 ntBASIC11.94□□□□□ -0.5
Sox4Q06831 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox4Q06831 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Sox4Q06831 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox4Q06831 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox4Q06831 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox4Q06831 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Sox4Q06831 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox4Q06831 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox4Q06831 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Gm14247-201ENSMUST00000120950 237 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Gm12164-201ENSMUST00000121695 551 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Gm7003-201ENSMUST00000195089 312 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox4Q06831 Gm43962-201ENSMUST00000203898 190 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Gm18212-201ENSMUST00000211678 889 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox4Q06831 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox4Q06831 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.93□□□□□ -0.5
Sox4Q06831 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox4Q06831 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox4Q06831 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox4Q06831 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox4Q06831 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox4Q06831 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox4Q06831 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox4Q06831 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms