Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm45433-201ENSMUST00000209386 247 ntBASIC12.98□□□□□ -0.33
VcpQ01853 Gm7848-201ENSMUST00000210739 718 ntBASIC12.98□□□□□ -0.33
VcpQ01853 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.98□□□□□ -0.33
VcpQ01853 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.98□□□□□ -0.33
VcpQ01853 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.97□□□□□ -0.33
VcpQ01853 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.97□□□□□ -0.33
VcpQ01853 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.97□□□□□ -0.33
VcpQ01853 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.97□□□□□ -0.33
VcpQ01853 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.97□□□□□ -0.33
VcpQ01853 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.97□□□□□ -0.33
VcpQ01853 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.97□□□□□ -0.33
VcpQ01853 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.97□□□□□ -0.33
VcpQ01853 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.97□□□□□ -0.33
VcpQ01853 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VcpQ01853 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.97□□□□□ -0.33
VcpQ01853 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.97□□□□□ -0.33
VcpQ01853 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.97□□□□□ -0.33
VcpQ01853 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcpQ01853 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.96□□□□□ -0.33
VcpQ01853 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.96□□□□□ -0.33
VcpQ01853 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.96□□□□□ -0.33
VcpQ01853 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
VcpQ01853 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
VcpQ01853 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VcpQ01853 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.96□□□□□ -0.33
VcpQ01853 Gm13888-201ENSMUST00000119148 422 ntBASIC12.96□□□□□ -0.33
VcpQ01853 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.96□□□□□ -0.33
VcpQ01853 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.96□□□□□ -0.33
VcpQ01853 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.96□□□□□ -0.33
VcpQ01853 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.96□□□□□ -0.33
VcpQ01853 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.96□□□□□ -0.33
VcpQ01853 Gm45925-201ENSMUST00000218882 744 ntBASIC12.96□□□□□ -0.33
VcpQ01853 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.96□□□□□ -0.33
VcpQ01853 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.96□□□□□ -0.33
VcpQ01853 Ntng1-201ENSMUST00000051253 327 ntBASIC12.96□□□□□ -0.33
VcpQ01853 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Gm10179-201ENSMUST00000086233 688 ntBASIC12.96□□□□□ -0.33
VcpQ01853 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcpQ01853 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcpQ01853 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcpQ01853 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.96□□□□□ -0.34
VcpQ01853 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcpQ01853 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcpQ01853 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcpQ01853 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VcpQ01853 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcpQ01853 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms