Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GabpaQ00422 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm11660-201ENSMUST00000120955 412 ntBASIC13.74□□□□□ -0.21
GabpaQ00422 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.74□□□□□ -0.21
GabpaQ00422 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm44126-201ENSMUST00000204831 514 ntBASIC13.74□□□□□ -0.21
GabpaQ00422 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.74□□□□□ -0.21
GabpaQ00422 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
GabpaQ00422 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
GabpaQ00422 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.74□□□□□ -0.21
GabpaQ00422 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
GabpaQ00422 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.74□□□□□ -0.21
GabpaQ00422 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GabpaQ00422 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.73□□□□□ -0.21
GabpaQ00422 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GabpaQ00422 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
GabpaQ00422 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm15131-201ENSMUST00000119124 595 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm17391-201ENSMUST00000171036 126 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm4310-201ENSMUST00000177847 889 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm43916-201ENSMUST00000205062 967 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm10179-201ENSMUST00000086233 688 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
GabpaQ00422 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.73□□□□□ -0.21
GabpaQ00422 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GabpaQ00422 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
GabpaQ00422 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.72□□□□□ -0.21
GabpaQ00422 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.72□□□□□ -0.21
GabpaQ00422 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.72□□□□□ -0.21
GabpaQ00422 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms