Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Map1b-203ENSMUST00000223725 2669 ntBASIC11.52□□□□□ -0.57
Nkx3-2P97503 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.51□□□□□ -0.57
Nkx3-2P97503 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.51□□□□□ -0.57
Nkx3-2P97503 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.51□□□□□ -0.57
Nkx3-2P97503 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm42937-201ENSMUST00000197360 752 ntBASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm44958-201ENSMUST00000203734 736 ntBASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm19208-201ENSMUST00000213861 912 ntBASIC11.51□□□□□ -0.57
Nkx3-2P97503 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gzmn-202ENSMUST00000225535 989 ntBASIC11.51□□□□□ -0.57
Nkx3-2P97503 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx3-2P97503 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm27341-201ENSMUST00000183570 106 ntBASIC11.5□□□□□ -0.57
Nkx3-2P97503 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm19994-201ENSMUST00000217086 586 ntBASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx3-2P97503 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms