Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.21□□□□□ -0.61
Cacna1aP97445 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cacna1aP97445 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.21□□□□□ -0.61
Cacna1aP97445 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Gm23045-201ENSMUST00000175041 96 ntBASIC11.21□□□□□ -0.62
Cacna1aP97445 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.62
Cacna1aP97445 Gm42657-201ENSMUST00000201746 211 ntBASIC11.21□□□□□ -0.62
Cacna1aP97445 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.21□□□□□ -0.62
Cacna1aP97445 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.21□□□□□ -0.62
Cacna1aP97445 Grk6-205ENSMUST00000224653 2976 ntBASIC11.21□□□□□ -0.62
Cacna1aP97445 Gm10288-201ENSMUST00000084614 537 ntBASIC11.21□□□□□ -0.62
Cacna1aP97445 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cacna1aP97445 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Cacna1aP97445 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cacna1aP97445 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm8731-201ENSMUST00000118088 412 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm14585-201ENSMUST00000120713 634 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm18201-201ENSMUST00000174735 875 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cacna1aP97445 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm2875-201ENSMUST00000211333 360 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Gm4604-201ENSMUST00000025040 390 ntBASIC11.2□□□□□ -0.62
Cacna1aP97445 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cacna1aP97445 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cacna1aP97445 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms