Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim43cP86449 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim43cP86449 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Gm44364-201ENSMUST00000198368 141 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Gm4607-201ENSMUST00000206649 577 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Gm17931-201ENSMUST00000208132 634 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Gm45598-202ENSMUST00000210719 986 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim43cP86449 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.18□□□□□ -0.3
Trim43cP86449 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim43cP86449 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim43cP86449 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.17□□□□□ -0.3
Trim43cP86449 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim43cP86449 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim43cP86449 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Gm20482-202ENSMUST00000174729 825 ntBASIC13.17□□□□□ -0.3
Trim43cP86449 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Rprl1-202ENSMUST00000198476 238 ntBASIC13.17□□□□□ -0.3
Trim43cP86449 Gm44967-201ENSMUST00000207047 631 ntBASIC13.17□□□□□ -0.3
Trim43cP86449 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.17□□□□□ -0.3
Trim43cP86449 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Gm5455-201ENSMUST00000058710 715 ntBASIC13.17□□□□□ -0.3
Trim43cP86449 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim43cP86449 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim43cP86449 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.17□□□□□ -0.3
Trim43cP86449 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43cP86449 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim43cP86449 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43cP86449 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim43cP86449 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim43cP86449 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43cP86449 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.16□□□□□ -0.3
Trim43cP86449 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43cP86449 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms