Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Gm7809-201ENSMUST00000153199 742 ntBASIC12.5□□□□□ -0.41
Trim43bP86448 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trim43bP86448 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trim43bP86448 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.5□□□□□ -0.41
Trim43bP86448 Olfr284-202ENSMUST00000206647 966 ntBASIC12.5□□□□□ -0.41
Trim43bP86448 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim43bP86448 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim43bP86448 Olfr582-201ENSMUST00000098212 960 ntBASIC12.5□□□□□ -0.41
Trim43bP86448 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.5□□□□□ -0.41
Trim43bP86448 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.5□□□□□ -0.41
Trim43bP86448 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim43bP86448 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43bP86448 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43bP86448 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim43bP86448 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Trim43bP86448 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim43bP86448 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm3890-201ENSMUST00000182416 207 ntBASIC12.49□□□□□ -0.41
Trim43bP86448 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm7046-201ENSMUST00000221351 977 ntBASIC12.49□□□□□ -0.41
Trim43bP86448 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm9823-201ENSMUST00000051212 327 ntBASIC12.49□□□□□ -0.41
Trim43bP86448 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim43bP86448 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43bP86448 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43bP86448 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43bP86448 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim43bP86448 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim43bP86448 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Gm24231-201ENSMUST00000104315 133 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Gm13297-201ENSMUST00000120205 934 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Gm13342-201ENSMUST00000121055 207 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim43bP86448 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim43bP86448 Gm6222-202ENSMUST00000182143 629 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Gm37489-201ENSMUST00000191883 159 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Gm43822-201ENSMUST00000200285 476 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trim43bP86448 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim43bP86448 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.48□□□□□ -0.41
Trim43bP86448 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43bP86448 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms