Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Gm25214-201ENSMUST00000104573 129 ntBASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gm23912-201ENSMUST00000104687 87 ntBASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gm4986-201ENSMUST00000119731 549 ntBASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.68□□□□□ -0.7
Hist1h3bP84228 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.68□□□□□ -0.7
Hist1h3bP84228 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.68□□□□□ -0.7
Hist1h3bP84228 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h3bP84228 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.67□□□□□ -0.7
Hist1h3bP84228 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.67□□□□□ -0.7
Hist1h3bP84228 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm17420-201ENSMUST00000164753 153 ntBASIC10.67□□□□□ -0.7
Hist1h3bP84228 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm10478-201ENSMUST00000084451 396 ntBASIC10.67□□□□□ -0.7
Hist1h3bP84228 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h3bP84228 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.66□□□□□ -0.7
Hist1h3bP84228 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.66□□□□□ -0.7
Hist1h3bP84228 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h3bP84228 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms