Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.46□□□□□ -0.41
Msx3P70354 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.46□□□□□ -0.41
Msx3P70354 Gm11222-201ENSMUST00000119005 738 ntBASIC12.46□□□□□ -0.41
Msx3P70354 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.46□□□□□ -0.41
Msx3P70354 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.46□□□□□ -0.41
Msx3P70354 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.46□□□□□ -0.41
Msx3P70354 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.46□□□□□ -0.41
Msx3P70354 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.46□□□□□ -0.41
Msx3P70354 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.46□□□□□ -0.41
Msx3P70354 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.46□□□□□ -0.41
Msx3P70354 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Msx3P70354 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Msx3P70354 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Msx3P70354 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msx3P70354 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.46□□□□□ -0.41
Msx3P70354 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Msx3P70354 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.46□□□□□ -0.42
Msx3P70354 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.46□□□□□ -0.42
Msx3P70354 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.46□□□□□ -0.42
Msx3P70354 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msx3P70354 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Msx3P70354 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Msx3P70354 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Msx3P70354 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Msx3P70354 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Msx3P70354 Gm15610-201ENSMUST00000120584 195 ntBASIC12.45□□□□□ -0.42
Msx3P70354 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.45□□□□□ -0.42
Msx3P70354 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.45□□□□□ -0.42
Msx3P70354 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Msx3P70354 Gm38241-201ENSMUST00000192641 898 ntBASIC12.45□□□□□ -0.42
Msx3P70354 Gm10608-202ENSMUST00000213924 676 ntBASIC12.45□□□□□ -0.42
Msx3P70354 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.45□□□□□ -0.42
Msx3P70354 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Msx3P70354 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Msx3P70354 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.45□□□□□ -0.42
Msx3P70354 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Msx3P70354 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Msx3P70354 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msx3P70354 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.44□□□□□ -0.42
Msx3P70354 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Msx3P70354 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Gm15370-201ENSMUST00000117158 253 ntBASIC12.44□□□□□ -0.42
Msx3P70354 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.44□□□□□ -0.42
Msx3P70354 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Gm17931-201ENSMUST00000208132 634 ntBASIC12.44□□□□□ -0.42
Msx3P70354 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.44□□□□□ -0.42
Msx3P70354 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.44□□□□□ -0.42
Msx3P70354 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.44□□□□□ -0.42
Msx3P70354 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms