Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cux2P70298 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC19.45■□□□□ 0.7
Cux2P70298 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC19.45■□□□□ 0.7
Cux2P70298 Gm5335-201ENSMUST00000182995 1000 ntBASIC19.45■□□□□ 0.7
Cux2P70298 Mir7051-201ENSMUST00000184167 73 ntBASIC19.45■□□□□ 0.7
Cux2P70298 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC19.45■□□□□ 0.7
Cux2P70298 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC19.45■□□□□ 0.7
Cux2P70298 AC152169.1-201ENSMUST00000223901 701 ntBASIC19.45■□□□□ 0.7
Cux2P70298 AC154759.1-201ENSMUST00000224137 1159 ntBASIC19.45■□□□□ 0.7
Cux2P70298 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC19.45■□□□□ 0.7
Cux2P70298 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cux2P70298 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cux2P70298 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Gm13171-201ENSMUST00000117233 391 ntBASIC19.44■□□□□ 0.7
Cux2P70298 Gm13094-201ENSMUST00000117930 409 ntBASIC19.44■□□□□ 0.7
Cux2P70298 Gm25569-201ENSMUST00000157175 131 ntBASIC19.44■□□□□ 0.7
Cux2P70298 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC19.44■□□□□ 0.7
Cux2P70298 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cux2P70298 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Cux2P70298 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cux2P70298 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cux2P70298 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC19.44■□□□□ 0.7
Cux2P70298 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cux2P70298 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC19.43■□□□□ 0.7
Cux2P70298 Gm6158-201ENSMUST00000109467 904 ntBASIC19.43■□□□□ 0.7
Cux2P70298 Gm15982-201ENSMUST00000121681 554 ntBASIC19.43■□□□□ 0.7
Cux2P70298 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC19.43■□□□□ 0.7
Cux2P70298 Gm18123-201ENSMUST00000210874 822 ntBASIC19.43■□□□□ 0.7
Cux2P70298 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cux2P70298 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cux2P70298 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Cux2P70298 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC19.43■□□□□ 0.7
Cux2P70298 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Cux2P70298 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cux2P70298 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cux2P70298 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC19.43■□□□□ 0.7
Cux2P70298 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Gm37600-201ENSMUST00000193764 3292 ntBASIC19.43■□□□□ 0.7
Cux2P70298 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cux2P70298 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Cux2P70298 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cux2P70298 Gm13286-201ENSMUST00000117750 537 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Mir6953-201ENSMUST00000184745 68 ntBASIC19.42■□□□□ 0.7
Cux2P70298 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC19.42■□□□□ 0.7
Cux2P70298 Gm4903-201ENSMUST00000210462 405 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Cux2P70298 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC19.42■□□□□ 0.7
Cux2P70298 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC19.42■□□□□ 0.7
Cux2P70298 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms