Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lhx1P63006 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.91□□□□□ -0.5
Lhx1P63006 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lhx1P63006 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm11660-201ENSMUST00000120955 412 ntBASIC11.91□□□□□ -0.5
Lhx1P63006 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.91□□□□□ -0.5
Lhx1P63006 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 AU022133-201ENSMUST00000200601 873 ntBASIC11.91□□□□□ -0.5
Lhx1P63006 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.91□□□□□ -0.5
Lhx1P63006 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.91□□□□□ -0.5
Lhx1P63006 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx1P63006 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lhx1P63006 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lhx1P63006 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Gm23200-201ENSMUST00000104379 132 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Gm18734-201ENSMUST00000172937 808 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 Gm18893-201ENSMUST00000198416 943 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Lhx1P63006 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Gm807-202ENSMUST00000224929 408 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Gm5705-201ENSMUST00000066241 711 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lhx1P63006 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.9□□□□□ -0.5
Lhx1P63006 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx1P63006 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.9□□□□□ -0.51
Lhx1P63006 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.9□□□□□ -0.51
Lhx1P63006 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lhx1P63006 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.9□□□□□ -0.51
Lhx1P63006 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lhx1P63006 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lhx1P63006 Gm23596-201ENSMUST00000104304 132 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Lhx1P63006 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.89□□□□□ -0.51
Lhx1P63006 Mir5120-201ENSMUST00000175020 78 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms