Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Lsm3P62311 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11□□□□□ -0.65
Lsm3P62311 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lsm3P62311 Gm27525-201ENSMUST00000184465 107 ntBASIC11□□□□□ -0.65
Lsm3P62311 Gm4034-201ENSMUST00000187674 480 ntBASIC11□□□□□ -0.65
Lsm3P62311 Gm5264-201ENSMUST00000190584 848 ntBASIC11□□□□□ -0.65
Lsm3P62311 Gm43416-201ENSMUST00000201916 1015 ntBASIC11□□□□□ -0.65
Lsm3P62311 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11□□□□□ -0.65
Lsm3P62311 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Gm36940-201ENSMUST00000194281 2036 ntBASIC11□□□□□ -0.65
Lsm3P62311 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11□□□□□ -0.65
Lsm3P62311 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
Lsm3P62311 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Lsm3P62311 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Lsm3P62311 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Gm23363-201ENSMUST00000175024 79 ntBASIC10.99□□□□□ -0.65
Lsm3P62311 Gm7775-201ENSMUST00000218871 853 ntBASIC10.99□□□□□ -0.65
Lsm3P62311 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Lsm3P62311 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Lsm3P62311 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.99□□□□□ -0.65
Lsm3P62311 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.99□□□□□ -0.65
Lsm3P62311 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.99□□□□□ -0.65
Lsm3P62311 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Lsm3P62311 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Lsm3P62311 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Lsm3P62311 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm3P62311 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Lsm3P62311 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Lsm3P62311 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Lsm3P62311 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Lsm3P62311 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Gm12384-201ENSMUST00000119228 919 ntBASIC10.98□□□□□ -0.65
Lsm3P62311 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.98□□□□□ -0.65
Lsm3P62311 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.98□□□□□ -0.65
Lsm3P62311 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.98□□□□□ -0.65
Lsm3P62311 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.98□□□□□ -0.65
Lsm3P62311 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.98□□□□□ -0.65
Lsm3P62311 Itm2b-204ENSMUST00000228637 783 ntBASIC10.98□□□□□ -0.65
Lsm3P62311 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Lsm3P62311 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms