Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Sf3b6P59708 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Sf3b6P59708 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.77□□□□□ -0.68
Sf3b6P59708 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.77□□□□□ -0.68
Sf3b6P59708 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Sf3b6P59708 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sf3b6P59708 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.77□□□□□ -0.69
Sf3b6P59708 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gm18062-201ENSMUST00000208020 547 ntBASIC10.77□□□□□ -0.69
Sf3b6P59708 Gm18055-201ENSMUST00000208254 547 ntBASIC10.77□□□□□ -0.69
Sf3b6P59708 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.77□□□□□ -0.69
Sf3b6P59708 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.77□□□□□ -0.69
Sf3b6P59708 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sf3b6P59708 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sf3b6P59708 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm13369-201ENSMUST00000119442 987 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm24196-201ENSMUST00000179161 110 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.76□□□□□ -0.69
Sf3b6P59708 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm8420-201ENSMUST00000097103 598 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm6091-201ENSMUST00000098307 165 ntBASIC10.76□□□□□ -0.69
Sf3b6P59708 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms