Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nphp4P59240 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 AC166836.1-201ENSMUST00000219933 1795 ntBASIC16.26■□□□□ 0.19
Nphp4P59240 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nphp4P59240 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nphp4P59240 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nphp4P59240 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC16.26■□□□□ 0.19
Nphp4P59240 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC16.26■□□□□ 0.19
Nphp4P59240 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nphp4P59240 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nphp4P59240 Gm7600-201ENSMUST00000209657 785 ntBASIC16.26■□□□□ 0.19
Nphp4P59240 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 AC164437.3-201ENSMUST00000228323 347 ntBASIC16.26■□□□□ 0.19
Nphp4P59240 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nphp4P59240 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Nphp4P59240 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nphp4P59240 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nphp4P59240 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Nphp4P59240 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC16.25■□□□□ 0.19
Nphp4P59240 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Gm14942-201ENSMUST00000119642 336 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 Mir1901-201ENSMUST00000122616 78 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Nphp4P59240 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Gm18159-201ENSMUST00000174516 1070 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 Gm28388-201ENSMUST00000186262 437 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 Gm37905-201ENSMUST00000195310 341 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 Gm9645-201ENSMUST00000197131 792 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC16.25■□□□□ 0.19
Nphp4P59240 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC16.25■□□□□ 0.19
Nphp4P59240 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC16.25■□□□□ 0.19
Nphp4P59240 AC132901.1-201ENSMUST00000224345 508 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 AC115122.1-201ENSMUST00000224850 1040 ntBASIC16.25■□□□□ 0.19
Nphp4P59240 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.25■□□□□ 0.19
Nphp4P59240 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nphp4P59240 AC108858.2-201ENSMUST00000228186 1425 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nphp4P59240 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nphp4P59240 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Gm45428-201ENSMUST00000209619 1789 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Gm38089-201ENSMUST00000193585 1514 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC16.24■□□□□ 0.19
Nphp4P59240 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC16.24■□□□□ 0.19
Nphp4P59240 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Gm37981-201ENSMUST00000194280 535 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 Gm38314-201ENSMUST00000195709 625 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 Gm8574-201ENSMUST00000203207 924 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 Gm44158-201ENSMUST00000203881 505 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC16.24■□□□□ 0.19
Nphp4P59240 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nphp4P59240 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nphp4P59240 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Nphp4P59240 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 CT009757.3-201ENSMUST00000223367 2320 ntBASIC16.24■□□□□ 0.19
Nphp4P59240 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nphp4P59240 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Nphp4P59240 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms