Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Cdh11P55288 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh11P55288 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh11P55288 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdh11P55288 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Gm15370-201ENSMUST00000117158 253 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdh11P55288 Mospd4-201ENSMUST00000180618 576 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 Gm7783-201ENSMUST00000204795 781 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdh11P55288 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.07□□□□□ -0.64
Cdh11P55288 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh11P55288 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh11P55288 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cdh11P55288 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Cdh11P55288 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Cdh11P55288 Gm4986-201ENSMUST00000119731 549 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 Gm13786-201ENSMUST00000122371 333 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdh11P55288 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Gm2991-201ENSMUST00000173338 480 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 Gm27243-201ENSMUST00000183964 521 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cdh11P55288 Gm38341-201ENSMUST00000195357 515 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdh11P55288 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.06□□□□□ -0.64
Cdh11P55288 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.06□□□□□ -0.64
Cdh11P55288 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms