Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NcanP55066 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NcanP55066 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.72□□□□□ -0.37
NcanP55066 Gm13445-201ENSMUST00000121664 307 ntBASIC12.72□□□□□ -0.37
NcanP55066 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Gm25226-201ENSMUST00000158198 123 ntBASIC12.72□□□□□ -0.37
NcanP55066 Gm8459-201ENSMUST00000162504 760 ntBASIC12.72□□□□□ -0.37
NcanP55066 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.72□□□□□ -0.37
NcanP55066 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.72□□□□□ -0.37
NcanP55066 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.72□□□□□ -0.37
NcanP55066 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.72□□□□□ -0.37
NcanP55066 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Gm5650-201ENSMUST00000209641 598 ntBASIC12.72□□□□□ -0.37
NcanP55066 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.72□□□□□ -0.37
NcanP55066 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NcanP55066 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.72□□□□□ -0.37
NcanP55066 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NcanP55066 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
NcanP55066 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NcanP55066 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.72□□□□□ -0.37
NcanP55066 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.72□□□□□ -0.37
NcanP55066 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NcanP55066 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
NcanP55066 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.71□□□□□ -0.37
NcanP55066 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.71□□□□□ -0.37
NcanP55066 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.71□□□□□ -0.37
NcanP55066 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NcanP55066 Gm23062-201ENSMUST00000102349 110 ntBASIC12.71□□□□□ -0.37
NcanP55066 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Gm11957-201ENSMUST00000118304 779 ntBASIC12.71□□□□□ -0.37
NcanP55066 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.71□□□□□ -0.37
NcanP55066 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC12.71□□□□□ -0.37
NcanP55066 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NcanP55066 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.71□□□□□ -0.37
NcanP55066 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.71□□□□□ -0.37
NcanP55066 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.71□□□□□ -0.37
NcanP55066 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.71□□□□□ -0.37
NcanP55066 Gm45085-201ENSMUST00000209100 441 ntBASIC12.71□□□□□ -0.37
NcanP55066 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NcanP55066 Gm10580-201ENSMUST00000097985 396 ntBASIC12.71□□□□□ -0.37
NcanP55066 Gm10581-201ENSMUST00000097986 231 ntBASIC12.71□□□□□ -0.37
NcanP55066 Gm10582-201ENSMUST00000097987 396 ntBASIC12.71□□□□□ -0.37
NcanP55066 Gm10583-201ENSMUST00000097988 396 ntBASIC12.71□□□□□ -0.37
NcanP55066 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
NcanP55066 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NcanP55066 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.71□□□□□ -0.37
NcanP55066 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
NcanP55066 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.71□□□□□ -0.38
NcanP55066 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
NcanP55066 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
NcanP55066 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
NcanP55066 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NcanP55066 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.71□□□□□ -0.38
NcanP55066 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NcanP55066 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NcanP55066 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.7□□□□□ -0.38
NcanP55066 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NcanP55066 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NcanP55066 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NcanP55066 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NcanP55066 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NcanP55066 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NcanP55066 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NcanP55066 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.7□□□□□ -0.38
NcanP55066 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.7□□□□□ -0.38
NcanP55066 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms